PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0007430.1_g030.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 213aa MW: 23062.8 Da PI: 9.7697 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 42.9 | 1.1e-13 | 1 | 28 | 29 | 57 |
ZF-HD_dimer 29 mpsegeegtaaalkCaACgCHRnFHRrev 57 mp+ g+egt +alkCaAC+CHRnFHR+e Pav_sc0007430.1_g030.1.mk 1 MPA-GAEGTLDALKCAACNCHRNFHRKEG 28 566.8899*******************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 213 aa Download sequence |
MPAGAEGTLD ALKCAACNCH RNFHRKEGDS GGLALMNADP YGQLVPLHGQ HNHPQFSPYY 60 RTPAGYLHVA PPHRPHNHPQ FSPYYRTPAG YLHVAPHHRP LALPSTSGGG GTHSRGEEQE 120 DDVSNPSGGG GGGGGLGMGG GVHGTASSGK KRFRTKFTAE QKERMLTLAE TLGWRIQKQD 180 EPAIQQFCNE TGVKRNVLKV WMHNNKHTLG KKP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24660.1 | 8e-46 | ZF-HD family protein |