PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0004999.1_g050.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 216aa MW: 24286.9 Da PI: 7.3948 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30.4 | 8.8e-10 | 14 | 42 | 1 | 29 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g+WT+eEd++l+d+++ +G g+W++ ++ Pav_sc0004999.1_g050.1.mk 14 KGAWTKEEDQRLIDYIRVHGEGCWRSLPK 42 79**********************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDQRLIDYIR VHGEGCWRSL PKAAAPTPAS RLDFRNISPP 60 SAVVDKTTNK NSILNHKTIN TTSSNNNNNI VLFKPKMEED NIEEASSGTT TEEDHQQQQH 120 QQQKLQDHYM YKCSDLNLDL SIGLEPFQSE PTRASSGNSA ESRLQQNNYQ VFGTVQKAVV 180 TQAVCLCCQV GFQSSEACRN CQCTNGFYRF HRPLNS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09460.1 | 4e-26 | MYB family protein |