PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0004527.1_g020.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 165aa    MW: 18813.6 Da    PI: 8.1142
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0004527.1_g020.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.54.7e-181468150
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......k 50
                               lppGfrFhPtdeelv +yLk+kv + +l++ ++i+ev+++k++PwdLp        
  Pav_sc0004527.1_g020.1.mk 14 LPPGFRFHPTDEELVLQYLKRKVFSCPLPA-SIIPEVEVCKADPWDLPVpilqspV 68
                               79****************************.89**************953333321 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MERLNFVKNG VLRLPPGFRF HPTDEELVLQ YLKRKVFSCP LPASIIPEVE VCKADPWDLP  60
VPILQSPVVP MDNWVLCRIF LKKRGGKNEE EQVQQPCNDR VIRKPKTARP VFYDFMTKDR  120
ANLSLAPCSS SSGSSGVTEV VSSDQVDDHE ESSSCNSFPY FRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.11e-30NAC family protein