PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0004305.1_g160.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 178aa MW: 19915.2 Da PI: 5.9528 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.3 | 1.1e-10 | 80 | 109 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 +g+WT+eEd +l+++++ +G ++WktIa++ Pav_sc0004305.1_g160.1.mk 80 KGAWTAEEDHKLAEVIEVHGAKRWKTIASK 109 79**************************87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MCSSWGFVSS LPSRRLDDRA ASLHNLVSQK ASQNLSLSLS VSLSNTLTQS DPMAPMTEES 60 IKRKVKAGEA MKSSKKEVNK GAWTAEEDHK LAEVIEVHGA KRWKTIASKA AEHHQKVHIE 120 MKEDSSSEEG ASFASKETNK NMNNIDVDDF FDFSNEGPLN LEWVSKFLDF DDGRWLIN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28110.1 | 7e-08 | MYB family protein |