PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0003734.1_g100.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 247aa MW: 28146.1 Da PI: 6.6511

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0003734.1_g100.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	37.5	7.8e-12	66	138	4	90
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 + Y+++vGFs+ + + +++k +g i++ + Cs+e +++++ ++ C+a+l+++++ + w+ tk++++HnH Pav_sc0003734.1_g100.1.br 66 DVYSRHVGFSTHVGQFSRTKPDGPIVTWDCACSREVFKRKNVES--------------CNAMLRIERKGANSWVATKFVEDHNH 135 67**********************************998877..............************************ PP FAR1 88 ela 90 +++ Pav_sc0003734.1_g100.1.br 136 SMV 138 987 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MDTEVVVDVE GENMENHMEE NTEPGEKQNV NQNFTGREIS IQDDGNTKPH VGMEFESEEA 60 AKTLHDVYSR HVGFSTHVGQ FSRTKPDGPI VTWDCACSRE VFKRKNVESC NAMLRIERKG 120 ANSWVATKFV EDHNHSMVSP SKVHYLRPRR HFAGATKNTA ETLDATTDVY FATEGNHVSY 180 EPNRGGRSVS PVEPNHPARN LGPVDYTRPS RRKRTLGRDA QNLLKYFKKM HAENPGFYYA 240 IELDYEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	8e-42	FAR1 family protein