PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002792.1_g020.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 182aa MW: 20676.5 Da PI: 6.1164 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 57.5 | 4.8e-18 | 14 | 84 | 1 | 70 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew...yfFskrdkkyat 70 +ppGfrF+Pt+eel+ +yL+k+v+ +k++l +vi+++d++k+ePwd++ +++ee+ w + F+k++k+ +t Pav_sc0002792.1_g020.1.mk 14 VPPGFRFQPTEEELLLYYLRKRVSCEKIDL-DVIRDIDLTKLEPWDIR-GAATEEEGWvvcHIFIKKKKNLKT 84 69****************************.9***************8.444567777677999999987765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MSSISVSVNG QCQVPPGFRF QPTEEELLLY YLRKRVSCEK IDLDVIRDID LTKLEPWDIR 60 GAATEEEGWV VCHIFIKKKK NLKTLNSPSN SSFNYMGINT GHMLDSYYDE GSLEQMFQQV 120 ERNCKEENKA EVVKYNTKPL IYTSNQVIGA PDPKSLHQIV SGLTSWAAFD RLIASQLNGH 180 TA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 4e-20 | NAC family protein |