PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0002451.1_g290.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 922aa    MW: 103561 Da    PI: 5.5671
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0002451.1_g290.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.82.9e-1132100276
                                EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--T CS
                         B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLke 76 
                                +k +++s+v++ ++l+lpk+f+  h   +  ++tltle esg+++++ +    +++  +l++GWk+F+ a++L++
  Pav_sc0002451.1_g290.1.mk  32 VKSMIRSNVSSWNCLTLPKQFCHLHL--PLHDTTLTLEVESGEKYRIIF--LAGKR--ILSAGWKKFCTAHKLRV 100
                                6899******************6662..346789***************..55543..69*************97 PP
2B346.28.1e-15265362399
                                EE-..-HHHHTT-E.........E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS
                         B3   3 kvltpsdvlksgrl.........vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 
                                kv++ps+v+   +l         ++pkkf  +h   ++++++++lede+g+++e k+ ++k++    l++GW++F  a++L +g
  Pav_sc0002451.1_g290.1.mk 265 KVMMPSHVTGGFCLvnpthslhnSIPKKFSCQHL--PKQDTMIVLEDEDGKEFETKYLVEKCG----LSGGWRGFSIAHKLLQG 342
                                6666666666655534444444488999975663..45788****************666665....***************** PP

                                -EEEEEE-SSSEE..EEEEE-S CS
                         B3  78 DfvvFkldgrsefelvvkvfrk 99 
                                D+v+F+ +    f+ +v ++r+
  Pav_sc0002451.1_g290.1.mk 343 DIVIFHIV--APFKIKVYIVRS 362
                                ******65..589889988876 PP
3B3438.1e-146277011799
                                E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                 lpkkf+ +h   ++++++++lede+g+++e k+     +  + l++GW++F  +++L egD+v+F+++  s+f  +v ++r+
  Pav_sc0002451.1_g290.1.mk 627 GLPKKFCCDHL--PKQDTMIVLEDENGEEFETKY--LAEK--VGLSGGWRGFSMSHKLLEGDIVIFHVVTPSKF--KVYIIRS 701
                                59*****8884..347889***************..4444..55***********************8876888..8888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 922 aa     Download sequence    
MFDNFNEHEK SSASTQVEEI QAILGAEYPI IVKSMIRSNV SSWNCLTLPK QFCHLHLPLH  60
DTTLTLEVES GEKYRIIFLA GKRILSAGWK KFCTAHKLRV DTKPELIDNQ TEEDNEEFGS  120
KFPGGIRYPV PAADFEDVRS IENFTILVNG VTIDSWLSKQ LRTNYYDLCC SRGSFLHDHL  180
LKSINSKLAA EIITETTNIA NAIRACKLSA SHADYKMWEK TLNAFELLGK RDSCNMATHL  240
VAFVASKIAK EVEASLDPKF PVLLKVMMPS HVTGGFCLVN PTHSLHNSIP KKFSCQHLPK  300
QDTMIVLEDE DGKEFETKYL VEKCGLSGGW RGFSIAHKLL QGDIVIFHIV APFKIKVYIV  360
RSNGLDEVDC GHGLMSLDAC AKQIDAGQII PYETEKSGPV SDQSENDSED LSFEFMDGLR  420
LAESDVTFKE VKCMENFTVV VNGLVINSEF SKYILTKYFE LCCSQNAFLH EHLLEGLNCK  480
LIAGVISETV NIADAIRACK ITTTEGDFST WSKTLKAFED LGMSAGFLRA RLDRLSSLAS  540
ESKRLKEARL EKDHPEEEMR SLDANPLEVK ETINMTSEKL ELTFQEVAKA PCCLTAEILG  600
NLSIELCRLL EVVSANPKMP ESLVWQGLPK KFCCDHLPKQ DTMIVLEDEN GEEFETKYLA  660
EKVGLSGGWR GFSMSHKLLE GDIVIFHVVT PSKFKVYIIR SKGLDEADCA VGLMRLDACI  720
KQMDTEHIIS CEREESGNLE PIPEDHAIAF NTKSRPLSDQ SENDSEDLGF EVLDGLRLSE  780
SVVPFKEMYR MDNFNVLVNG LNINSEFSKY VLNKYYELCC SQKSFLHEHL LEGLNCKLIV  840
GVISETINIA DAIRACKITT SEVYFSTWNK TLIAFEGLGM NVGFLRARLD QLAILASKSK  900
RFKEARLEEL RGKAFGSKRG HK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.11e-28B3 family protein