PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002451.1_g270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 437aa MW: 48671.3 Da PI: 4.6679

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002451.1_g270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.6	4.7e-18	91	180	2	99
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 +kv++ps+v+ +l lpkkf+ eh +++++++ lede+g+++e k+ + + l++GW++F +++L egD++vF+l+ Pav_sc0002451.1_g270.1.mk 91 LKVMLPSHVTGGFWLGLPKKFCCEHL--PKQDIMIALEDENGEEFETKY--LADK--VGLSGGWRGFSISHKLLEGDVIVFHLV 168 699*****************9995..34889************..4444..45**********************9 PP SSSEE..EEEEE-S CS B3 86 grsefelvvkvfrk 99 + s+f +v ++r+ Pav_sc0002451.1_g270.1.mk 169 NPSKF--KVYIVRS 180 88888..8888775 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MAVLQDRKQR SSDLPPPKSN KGRPPKNREN LVRKKSSSLT QSKSIVVSAN PMMPERATVE 60 SLYDTSQAQS SVLERAQEVE VSLDPKFPSL LKVMLPSHVT GGFWLGLPKK FCCEHLPKQD 120 IMIALEDENG EEFETKYLAD KVGLSGGWRG FSISHKLLEG DVIVFHLVNP SKFKVYIVRS 180 NGLDELDGAL GLMRLDACKK MDTGDTFACE REESETLEPN SEDNAIAFIT KSCPISDQSE 240 SESGDVGFEV LDGLRLSESA VTFEEVKCMD DFNILVNGLI INSEFSKYIL NKYYELCCSQ 300 NSFLHEHLLE GLNCKLVAGV ISETVNIADA IRACDITTPE GNFSTWDQTL KAFQGLGMNI 360 GFLLARLDQL VSLASKSKRF KEARLEKDQA EEEMRSLEAK LLEVKEAVNR LESEIETLNT 420 SSENLGVMFQ DVAKASW

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MAVLQDRKQR SSDLPPPKSN KGRPPKNREN LVRKKSSSLT QSKSIVVSAN PMMPERATVE  60
SLYDTSQAQS SVLERAQEVE VSLDPKFPSL LKVMLPSHVT GGFWLGLPKK FCCEHLPKQD  120
IMIALEDENG EEFETKYLAD KVGLSGGWRG FSISHKLLEG DVIVFHLVNP SKFKVYIVRS  180
NGLDELDGAL GLMRLDACKK MDTGDTFACE REESETLEPN SEDNAIAFIT KSCPISDQSE  240
SESGDVGFEV LDGLRLSESA VTFEEVKCMD DFNILVNGLI INSEFSKYIL NKYYELCCSQ  300
NSFLHEHLLE GLNCKLVAGV ISETVNIADA IRACDITTPE GNFSTWDQTL KAFQGLGMNI  360
GFLLARLDQL VSLASKSKRF KEARLEKDQA EEEMRSLEAK LLEVKEAVNR LESEIETLNT  420
SSENLGVMFQ DVAKASW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	3e-43	B3 family protein