PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0002286.1_g150.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

ZF-HD

Protein Properties

Length: 449aa MW: 49435.8 Da PI: 7.422

Description

ZF-HD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0002286.1_g150.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	ZF-HD_dimer	104	9.6e-33	211	266	4	60
ZF-HD_dimer 4 vrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 +rY+eClkNhAa++Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+ev+ e Pav_sc0002286.1_g150.1.mk 211 IRYRECLKNHAANIGGNVFDGCGEFMPS-GEEGTLEALKCAACDCHRNFHRKEVDGE 266 79***********************9.999*******************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MDFRAQPQDN EMRTSGSLSY ASSAHHLSTK ESSPAAAAAA ADHHKRRVGI HNGNNTYATS 60 PHQTLDHHIQ HPHPPLQPLI RDPDPDSYPS RWPHHKQPTF MDFRAQPQDN EMRTSGSLSY 120 ASSAHHLSTK ESSPAAAAAA ADHHKRRVGI HNGNNTYATS PHQTLDHHIQ HPHPPLQPLI 180 RDPDPDRALT GTPVPPTVLA SGGPKSTSKI IRYRECLKNH AANIGGNVFD GCGEFMPSGE 240 EGTLEALKCA ACDCHRNFHR KEVDGETTAF SPGSRRSSIM LSPLQLPPPL PSPSSALHHH 300 HHHHQKFSMA PIIQPMNVAF GSGGGGTESS SEDLNVFQSN NAEGGLPMPP FAMSKKRFRT 360 KFTQDQKERM MEFAEKVGWR IQKQDEEEVE RFCAEVGVKR QVLRVWMHNN KNSAKKQSDI 420 LTTPTTTSLS FENVEAEEEG GGEGGRDNS

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MDFRAQPQDN EMRTSGSLSY ASSAHHLSTK ESSPAAAAAA ADHHKRRVGI HNGNNTYATS  60
PHQTLDHHIQ HPHPPLQPLI RDPDPDSYPS RWPHHKQPTF MDFRAQPQDN EMRTSGSLSY  120
ASSAHHLSTK ESSPAAAAAA ADHHKRRVGI HNGNNTYATS PHQTLDHHIQ HPHPPLQPLI  180
RDPDPDRALT GTPVPPTVLA SGGPKSTSKI IRYRECLKNH AANIGGNVFD GCGEFMPSGE  240
EGTLEALKCA ACDCHRNFHR KEVDGETTAF SPGSRRSSIM LSPLQLPPPL PSPSSALHHH  300
HHHHQKFSMA PIIQPMNVAF GSGGGGTESS SEDLNVFQSN NAEGGLPMPP FAMSKKRFRT  360
KFTQDQKERM MEFAEKVGWR IQKQDEEEVE RFCAEVGVKR QVLRVWMHNN KNSAKKQSDI  420
LTTPTTTSLS FENVEAEEEG GGEGGRDNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75240.1	1e-67	ZF-HD family protein