PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002266.1_g230.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 96aa MW: 10845 Da PI: 4.0985 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.6 | 5.9e-08 | 7 | 55 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47 WT eE + + a++ + + W+++++ ++ g++ q+k+++ + Pav_sc0002266.1_g230.1.mk 7 EWTREENKAFEIAIATYNIEciekgEWEKVSSSVP-GKSVHQIKLHFMHL 55 7****************999***************.**********9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MAGAIDEWTR EENKAFEIAI ATYNIECIEK GEWEKVSSSV PGKSVHQIKL HFMHLLMDVE 60 AIESDQGPLP DYKYDEDDGD DGDHGDTKEK EMSIVS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49010.1 | 1e-14 | MYB family protein |