PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002250.1_g270.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 140aa MW: 15992.6 Da PI: 6.2648 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 63.5 | 5.9e-20 | 50 | 138 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 +fYn+YAk++GFsvr +++sk+++ei ++++v +keg ++e ++ ++r+r + + gC+ak+ k++ k+ ++++++ Pav_sc0002250.1_g270.1.br 50 NFYNNYAKQAGFSVRSYCQQRSKTSNEILRKEYVRYKEGVYSKEVSN--GSERRRGVVQSGCNAKIAFLKTReGTKYIISNFVE 131 6******************************************9998..7888899999*******987776699********* PP FAR1 84 eHnHela 90 HnH+l+ Pav_sc0002250.1_g270.1.br 132 GHNHALT 138 *****96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
MGSPQEGLGT YEFMEDTNEN NSDLVFNPQV EDQHVPKIGQ EFESLEDAYN FYNNYAKQAG 60 FSVRSYCQQR SKTSNEILRK EYVRYKEGVY SKEVSNGSER RRGVVQSGCN AKIAFLKTRE 120 GTKYIISNFV EGHNHALTAP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 3e-15 | FAR1 family protein |