PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002080.1_g180.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 257aa MW: 28698.9 Da PI: 8.7305 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 74.3 | 1.5e-23 | 149 | 236 | 1 | 83 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 f+k+lt sd++++g +++p++ ae+ ++++ s++l+++d++ +sW++++iyr++++r++lt+GW+ Fv a++L++gD Pav_sc0002080.1_g180.1.mk 149 FCKTLTASDTSTHGGFSVPRRAAEKLfpqldfTMQPP-SQELVVRDLHDNSWTFRHIYRGQPKRHLLTTGWSLFVGAKRLRAGD 231 99*********************999*****955554.459******************************************* PP EEEEE CS B3 79 fvvFk 83 +v+F Pav_sc0002080.1_g180.1.mk 232 SVLFI 236 ****7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence |
MIMGSVEEKI KAGGLLSGAQ SSILDEMKLL KELQDHSGSR KAINSELWHA CAGPLVCLPQ 60 VGSLSYYFPQ GHSEQVAVST KRTATSQIPN YPNLPSQLLC QVQNVTLHAD KETDEIYAQM 120 SLKPVNSEKD VFPVPDFGLK PSKHPSEFFC KTLTASDTST HGGFSVPRRA AEKLFPQLDF 180 TMQPPSQELV VRDLHDNSWT FRHIYRGQPK RHLLTTGWSL FVGAKRLRAG DSVLFIRPVK 240 QHTHILELRC QLPLTVV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19850.1 | 1e-134 | ARF family protein |