PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0002024.1_g200.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 205aa MW: 23323.3 Da PI: 9.6426 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 33.4 | 1.2e-10 | 48 | 95 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++kGV ++g W A+I+ + +r++lg+f +++eAa a++ a+ kl++ Pav_sc0002024.1_g200.1.mk 48 KFKGVV-PQQNGHWGAQIYA------NhQRIWLGTFKSEKEAAMAYDSAAIKLRN 95 789996.566899****999......44**********99*************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MEEDAASSMI SSVQRNVALE TSDSNDNDFG LLHPNKRARL DNDVSFAKFK GVVPQQNGHW 60 GAQIYANHQR IWLGTFKSEK EAAMAYDSAA IKLRNGKDLH RNFPWTNFTI QEPDFQNHHT 120 TDAIIKMIRD GSYPSKFDAF IRSQKQSQTE EMGKGQNSLR VHGDGKILCR QLFQKELTPS 180 DVGKLNRLVI PKKYAVELSK HQFGM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51120.1 | 5e-63 | RAV family protein |