PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001877.1_g050.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 373aa    MW: 41005.6 Da    PI: 4.2893
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001877.1_g050.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.91.2e-161889165
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k...kvka.eekew...yfFskrd 65
                               lppGfrFhPtdee+++ yL++kv ++++ +  +i e+d++k+ePwdLp +   ++ + +++ew     F+k+ 
  Pav_sc0001877.1_g050.1.mk 18 LPPGFRFHPTDEEIITSYLTEKVIDSSFVA-IAIGEADLNKCEPWDLPiEiflSFGGrGQDEWvvcRVFHKNM 89
                               79*************************988.78**************95355522222444663333455444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MEQDMVANRG EEDQLIELPP GFRFHPTDEE IITSYLTEKV IDSSFVAIAI GEADLNKCEP  60
WDLPIEIFLS FGGRGQDEWV VCRVFHKNMG LKKTPTRMNS FGDHDLLDYS SLPPLMDPTS  120
FNNNIMNNND NKACGYGDHD VKPGTNLAST APSLSSAKAS SSDDHHAINN NNYLSYFSIG  180
GSGGQVQKPN FSFQVQPTSS YYQATSLSNP NMLYPHHHQF QNPNPNPSSF WFQPNPNNSD  240
YFQQGMIRVT NNTASDHDED DQAMLRAIAA ANNNNNNNNS NMNNETSSSA AAGFGSSGGL  300
ERQCKVEQFS SAPQSMFSIS QDTGISTDIN TTEISSSLVS SKQELGSTAD NCSSYDQRPS  360
VVPISDIEGL WDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.22e-25NAC family protein