PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001820.1_g080.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 171aa MW: 19627.8 Da PI: 6.2833 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 65.5 | 1.4e-20 | 84 | 171 | 1 | 87 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkle 82 +fY++YA +GFs+r+s+ ++s + g ++ r++vCskeg+r+++ ++ ++ r++r+etr +C+a++ vk ++ + vtk++ Pav_sc0001820.1_g080.1.br 84 RFYCNYALAIGFSIRRSRLRRS-EGGVVMGRQWVCSKEGSRSKKWTNrDNMVRTPRKETRENCHATFAVKYCPkRDAYIVTKFV 166 5********************9.8999***************9988846677889*****************999********* PP FAR1 83 leHnH 87 +eH+H Pav_sc0001820.1_g080.1.br 167 TEHSH 171 ****9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence |
MDAEASKTNG IQGQNSVPNS EGYFAEAESL EETENAPSLQ ILDSRTEEIT EKSGQFEYDG 60 LNFQNMSIAD LAEREFAKFE EAERFYCNYA LAIGFSIRRS RLRRSEGGVV MGRQWVCSKE 120 GSRSKKWTNR DNMVRTPRKE TRENCHATFA VKYCPKRDAY IVTKFVTEHS H |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59470.2 | 4e-13 | FAR1 family protein |