PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001812.1_g070.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 686aa MW: 75571.6 Da PI: 9.4183 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 23.2 | 1.6e-07 | 588 | 637 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ Pav_sc0001812.1_g070.1.mk 588 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 637 6789999*******************9988889**************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 686 aa Download sequence |
MVLQKRLDYG FNGYQVPATP RATRSARRRG AIRKRADDNS MGAFDLLATI AGKLLLEGES 60 SPASSHTSKD QRAGTKENCL DGDKPLKVEP CDQGSCDRRI PVSDHISQGP NQSSCSKESP 120 VHQNESSVMT TSNCSERFAS DMLVSGKCKN ETGSFTSKIE AGSSGCREAG EFKLDGEVKT 180 LVKDETNKSA KVLIGTGPDM CGLEDPVVWE GEPPALVSSD SSTKVPMYVD HIPQRSFPTS 240 RDDVKVVSRD DDENSSGCTH PVTSIKYSRP APSRIGDRRI RKILASKYWK VAPKLKDDIH 300 SNSCKWLPCT KRMYRDQKPN YHNRKNCYKR QRSQMNIPFK KRKLFDRSAI LNIDEGISRE 360 GFFDSRGKGI TGDASCSKMQ GAAMKSSSLA VQHSSFQSRS SHVKLRIKSF RVPELFIEIP 420 DTATVGSLKK TVMDAVTAVL GGGLCVGVLL QGKKVRDDNK TLLQTGISQD NQLDSLGFTL 480 EPNSSQTPPP LCSGDSPCML PCDVLQPLTR YPSGPTSEAS PEPHPASLGN FIESDHDSAP 540 SPTDMSAEKS TTDSKALVAV PDMSVEALAV VPGHRKSKRF DIGQRRIRRP FSVAEVEALV 600 QAVEKLGTGR WRDVKLRAFD NAKHRTYVDL KDKWKTLVHT ARISPQQRRG EPVPQELLDR 660 VLAAHAYWSQ QQAKQQLKQP ETCLLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G07540.1 | 1e-111 | MYB_related family protein |