PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001751.1_g090.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 804aa MW: 89684.2 Da PI: 6.5096

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001751.1_g090.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	64.3	1.9e-20	659	755	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfv 80 +kvl++sdv+++gr+vlpkk ae+h +++ + ++ + +ed ++r+W+++++y ++ks++y+l+ ++ +Fv+angL+egDf+ Pav_sc0001751.1_g090.1.mk 659 QKVLKQSDVGSLGRIVLPKKEAETHlpELEARDGISIPMEDiGTSRVWNMRYRYwpNNKSRMYLLE-NTGDFVRANGLQEGDFI 741 79***********************999999****7778*****777777777777.************* PP EEEE-SS.SEE..EEE CS B3 81 vFkldgr.sefelvvk 95 v++ ++ ++ +++++ Pav_sc0001751.1_g090.1.mk 742 VIY--SDvKCNKYMIR 755 *..55588877766 PP

Sequence ? help Back to Top
Protein Sequence Length: 804 aa Download sequence
MKGKQVQVHH HQDLHAGDLH HHHMKDVNIP ISDGFGGGGA MEELEDQEDN LGVDPSEMWL 60 DDNDQETAFL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS STPAPVKSVT SSSTSSSISS 120 SSSAASWAIL RSDAEEDGER RQQQHHNSYN HRYQYSQVDD QAVDAHALSS TASMEISQPS 180 DLGREGGAID CMGAMETFGY TDLFESNEFF DLSSIFQSDS LLMEQFQQDD DHQQLLTPHQ 240 LQDPNEATAI IPQQQQQQEV AVRDEENNKK DDQNENKEPD DMAMVFLEWL RSNRETVSAE 300 DLRSVKIKKS TIECAARRLG GGKEAMKQLL KLVLEWVQTN HLQKRRSNSL TTKDADIVAQ 360 QQQYHDPFQN PNPNTSPRVL EPNPSCSFTQ TPWMAPPPHA AYDHAGGILV PTPPPPPPPA 420 AYPSMMGYIA PDQYVNGPGP YQPSPEYHHM IDSGQPTWPS SPFGMGTAHY GSFPDNNIHL 480 APPPQHRPQA FAGYGSQYQP YQYFPGNGEH QLMRLGSSAT KEARKKRMAR QRRLVSHHRH 540 GHHHQQQHLN AQMPDHLLHQ QHTRLVGNAA NLNCANSVPL QANPGNWFYW ATATAAPSPS 600 PAMMPSITPE AAPPPPVQQM DRPASTQAQN YNQGRSAAQE RQERRQGWKS EKNLKFLLQK 660 VLKQSDVGSL GRIVLPKKEA ETHLPELEAR DGISIPMEDI GTSRVWNMRY RYWPNNKSRM 720 YLLENTGDFV RANGLQEGDF IVIYSDVKCN KYMIRGVKVR QAGPKSEGNK RPGKSQRNQH 780 ASTPAGTNGS SPSSASASAT HKKQ

Sequence ? help Back to Top

Protein Sequence Length: 804 aa Download sequence

MKGKQVQVHH HQDLHAGDLH HHHMKDVNIP ISDGFGGGGA MEELEDQEDN LGVDPSEMWL  60
DDNDQETAFL ADVNDPSIFY NDHFPPLPDF PCMSSSSSSS STPAPVKSVT SSSTSSSISS  120
SSSAASWAIL RSDAEEDGER RQQQHHNSYN HRYQYSQVDD QAVDAHALSS TASMEISQPS  180
DLGREGGAID CMGAMETFGY TDLFESNEFF DLSSIFQSDS LLMEQFQQDD DHQQLLTPHQ  240
LQDPNEATAI IPQQQQQQEV AVRDEENNKK DDQNENKEPD DMAMVFLEWL RSNRETVSAE  300
DLRSVKIKKS TIECAARRLG GGKEAMKQLL KLVLEWVQTN HLQKRRSNSL TTKDADIVAQ  360
QQQYHDPFQN PNPNTSPRVL EPNPSCSFTQ TPWMAPPPHA AYDHAGGILV PTPPPPPPPA  420
AYPSMMGYIA PDQYVNGPGP YQPSPEYHHM IDSGQPTWPS SPFGMGTAHY GSFPDNNIHL  480
APPPQHRPQA FAGYGSQYQP YQYFPGNGEH QLMRLGSSAT KEARKKRMAR QRRLVSHHRH  540
GHHHQQQHLN AQMPDHLLHQ QHTRLVGNAA NLNCANSVPL QANPGNWFYW ATATAAPSPS  600
PAMMPSITPE AAPPPPVQQM DRPASTQAQN YNQGRSAAQE RQERRQGWKS EKNLKFLLQK  660
VLKQSDVGSL GRIVLPKKEA ETHLPELEAR DGISIPMEDI GTSRVWNMRY RYWPNNKSRM  720
YLLENTGDFV RANGLQEGDF IVIYSDVKCN KYMIRGVKVR QAGPKSEGNK RPGKSQRNQH  780
ASTPAGTNGS SPSSASASAT HKKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-139	B3 family protein