PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001673.1_g350.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | TCP | ||||||||
Protein Properties | Length: 206aa MW: 21728.6 Da PI: 7.2587 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 52.9 | 1.5e-16 | 1 | 72 | 35 | 105 |
TCP 35 LqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......kaaksaa.kskksqksaa 105 L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ +++ +++ + ++ + k+k++++s++ Pav_sc0001673.1_g350.1.mk 1 LTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMsVNGA-------LKIPtsapdpRPGEDPPdKKKRKRNSNS 72 8******************************8888855521111.......1222111212222222212222222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 206 aa Download sequence |
LTRELGHKSD GETIRWLLEH AEPAIIAATG TGTVPAIAMS VNGALKIPTS APDPRPGEDP 60 PDKKKRKRNS NSEYVDLNDG VSASAGLAPL TTERHHQQPP TAAVQAVVPQ GVLPMWAIPS 120 NGVVPGAFFM VPSASTQPHI FTFPTTVAAA PFINISARPI SSFVGPSSAS ATTHMAASTA 180 PQTLRDFSLE IYDKKELQFM SGSSNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45680.1 | 7e-55 | TCP family protein |