PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001583.1_g450.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 235aa MW: 27563.7 Da PI: 4.6913 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 59.5 | 1.1e-18 | 22 | 76 | 2 | 61 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfF 61 pGfrFhPtdeelv +yL++kve+k +++ e ik++diyk++PwdLp+ ++ +y + Pav_sc0001583.1_g450.1.mk 22 LPGFRFHPTDEELVEFYLRRKVEKKAISI-ELIKSIDIYKHDPWDLPS----MHTYIYIY 76 59***************************.89**************93....23445555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDSNYTSTKD DHQYIDEDDV QLPGFRFHPT DEELVEFYLR RKVEKKAISI ELIKSIDIYK 60 HDPWDLPSMH TYIYIYVPIN EFLLSLFNFS SLEIWTLCRI FKRNVSYKKY TADWRELSGA 120 KRHPVDTVSS KKCTSDQDDL DQSNNYISFG ASDNTICYEE KKPVVNHTNM NNFNGSNQQL 180 HAVGQLSSNM PATYPYMETF SNFSYQDLEN ELLNENWDEL RSAAVHLAFD PTFLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43000.1 | 1e-22 | NAC family protein |