PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001576.1_g320.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB | ||||||||
Protein Properties | Length: 188aa MW: 21753 Da PI: 10.6539 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.8 | 6e-14 | 50 | 95 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+WT+eEde l+ vk+ G+++W++I ++ + Rt+k+c++rw + Pav_sc0001576.1_g320.1.mk 50 KGPWTAEEDEVLISHVKKCGPRDWSSIRSRGLLPRTGKSCRLRWVN 95 79*************************8775577**********87 PP | |||||||
2 | Myb_DNA-binding | 40.9 | 4.7e-13 | 106 | 143 | 3 | 42 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcks 42 ++++eE+ +++ +q+G++ W++Ia +++ gRt++++k+ Pav_sc0001576.1_g320.1.mk 106 KFSPEEERMVIQLQAQFGNK-WAKIATYLP-GRTDNDVKN 143 89******************.*********.*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence |
MGLMEPNPNY IAGKKVYSYN MMGRSQQIEQ VCEHQCQYGN SKRPNANVKK GPWTAEEDEV 60 LISHVKKCGP RDWSSIRSRG LLPRTGKSCR LRWVNKLRPN WKTGSKFSPE EERMVIQLQA 120 QFGNKWAKIA TYLPGRTDND VKNLCSTRRK RFQRILQKST SLQSQNNKRK SPLVQHELPE 180 VKVPPDPC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 8e-60 | MYB family protein |