PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001557.1_g170.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25151.8 Da PI: 5.5989 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.1e-18 | 115 | 165 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp +ng +r++lg++ t+e+A a+++a+ k++g Pav_sc0001557.1_g170.1.mk 115 HYRGVRRRP-WGKFAAEIRDPAKNG--ARVWLGTYETPEDAGLAYDRAAFKIRG 165 7********.***********9987..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MYGETTLELE SNLALLESIR HHLLDDLEPQ ATSFSGNNVS VTFPLFVTEN WCESSLEAEH 60 VDNTTQAEGV DNTIQDMLEA LHDVNYVGCV VSDDEVQLKE QVAESAVHAP RGERHYRGVR 120 RRPWGKFAAE IRDPAKNGAR VWLGTYETPE DAGLAYDRAA FKIRGCKAKL NFPHLIGSSN 180 VEPVRVTPKR RRSPDQCSSL SSSAYTSDNG SSKPKRREAG VDNHVAA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 189 | 215 | KRRRSPDQCSSLSSSAYTSDNGSSKPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 7e-41 | ERF family protein |