PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001557.1_g150.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 384aa    MW: 42113.6 Da    PI: 4.5918
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001557.1_g150.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.71.2e-17111160355
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                y+GVr+++ +g+++AeIrdp +ng  +r +lg++ tae+Aa a+++a+ k++g
  Pav_sc0001557.1_g150.1.mk 111 YRGVRQRP-WGKYAAEIRDPAKNG--ARMWLGTYETAEDAAFAYDRAAFKIRG 160
                                9*******.***********9987..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 384 aa     Download sequence    
MLGDEKSSLD SDFSLLETIH QHLLDDNYFH ETFMASLFPN IPPAVEDLGK LSLMVPGGES  60
SESSSWSPPN KNGVAEPAPA MWAETTEIKD HVQPKLAARE THCPPRGRQN YRGVRQRPWG  120
KYAAEIRDPA KNGARMWLGT YETAEDAAFA YDRAAFKIRG SKALLNFPHL IGSADDVCDR  180
TRVNSTRRYR ECCDSLVSSS DGGSPKRRRS SGVGSISLES DFALLESIRQ HLLDDNFDNV  240
LEESSPTGSG NPPPMFCRSF SFSALFSEES WSDMPLNVDD NNDVVVSSGS TDSGWSPSSD  300
HSHIDVVETT PVKPEPQEVV LEGIEVAHSG SPRPKRRNTG VSSVAGAESG SESLVEMVEM  360
SQLAVVDQWL NDLNTAVFPM PHEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.11e-26ERF family protein