PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001545.1_g110.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | GeBP | ||||||||
Protein Properties | Length: 400aa MW: 43601.8 Da PI: 6.1572 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 118.2 | 4.6e-37 | 175 | 269 | 1 | 98 |
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskeh 84 klfqr+ws++Dei++L+G+id+ +k+g++p++d+ af++f+kks++++v+k+ql +KirrLKkK++++v+k gk+ + k+h Pav_sc0001545.1_g110.1.mk 175 KLFQRIWSDDDEIAILKGMIDYSTKKGADPYSDMGAFHDFIKKSLKADVNKTQLQDKIRRLKKKYEMNVAK---GKKYNPVKPH 255 579********************************************************************...999999**** PP DUF573 85 dqkifelskkiWgs 98 +qk+f+ls+k+Wgs Pav_sc0001545.1_g110.1.mk 256 EQKVFDLSNKVWGS 269 ************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 400 aa Download sequence |
MAPKRPSPLD EPPAASSSEE EVASSEEEVD GEEEEESGSG SESESEEPEP PKAAPTPVAE 60 KKPPPKKPDS ATVNSKPQSS SSGSESESES DSELDKDMVV KPIASKPMEE TPKTKKPRSK 120 ASATTTPAAR AGSKRPSESD PKDSKRPKKK IPDPDQEPDH AGEETKKAGG DDSKKLFQRI 180 WSDDDEIAIL KGMIDYSTKK GADPYSDMGA FHDFIKKSLK ADVNKTQLQD KIRRLKKKYE 240 MNVAKGKKYN PVKPHEQKVF DLSNKVWGSG EGSIGVGGLS EQSKSNGKAR TNQKGNNKTL 300 ASLKAEILSS PEPPKECEKV EIGSESLSEV IGYDKGFREL GLPEGVVKQG LELIGGAKRA 360 ELKEKWKKLH VAELDLFVKR SELMRDQAKV ILEALKSSEH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25210.1 | 3e-29 | GeBP family protein |