PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001529.1_g380.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 306aa    MW: 33827 Da    PI: 6.5883
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001529.1_g380.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1085.1e-341872155
                    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                               k+rlrWt+eLHerFv+av+qLGG+++AtPk +l++m+v+gLt++hvkSHLQkYRl
  Pav_sc0001529.1_g380.1.mk 18 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRL 72
                               79****************************************************8 PP
2Myb_DNA-binding63.63.8e-202071148
                               TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                               r+rWT e++e++vdav+qlGg+   t+k + r mg +g+t +++ks++qky+
  Pav_sc0001529.1_g380.1.mk 20 RLRWTHELHERFVDAVAQLGGPdraTPKGVLRVMGvQGLTIYHVKSHLQKYR 71
                               89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEPINGGNSL NNPNLASKQR LRWTHELHER FVDAVAQLGG PDRATPKGVL RVMGVQGLTI  60
YHVKSHLQKY RLAKYLPDSS SDGKKADKKE PGDVLSNLDG SSGMQITEAL KLQMEVQKRL  120
HEQLEVQRQL QLRIEAQGKY LKKIIEEQQR LSGVHSEAPG SGHLARLSDD NCPESDNKTD  180
PATPAPTSEC PLQDKAAKEC TPAKSLSIDE SFSSRHEPLT PDSACHVDSP AESPKAESSM  240
KKRRVIMGEA FADPEVVLTH QILESSLNSS YQQTHTTFLP REQFDPSSGI SFRNENILEK  300
VAGSDM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-113G2-like family protein