PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001369.1_g440.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 827aa MW: 95284.1 Da PI: 7.4066

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001369.1_g440.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	69.2	1e-21	60	143	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 ++Yn YAkevGF+vr+++s +++++e + + ++Cs +g+++ ++ + r r+etrtgC a+l++++ ++++w+v ++ le Pav_sc0001369.1_g440.1.mk 60 NYYNCYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRIKDVN-----RLRKETRTGCPAMLRMRLVDSKRWRVLEVTLE 138 69***************************************9988.....99************************** PP FAR1 85 HnHel 89 HnH l Pav_sc0001369.1_g440.1.mk 139 HNHLL 143 *87 PP
2	FAR1	70.9	3e-22	491	573	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleH 85 fYn YAk+ GF vr+s++ ++ +++e ++ ++ Cs g++++++ + r+r+etrtgC a++k +++++++w+v+++eleH Pav_sc0001369.1_g440.1.mk 491 FYNCYAKQQGFGVRVSNTWYR-KSKERYRGKLSCSSAGFKKKSEAN-----RPRPETRTGCPAMIKFRLMDSNRWRVIEVELEH 568 9*************99997.66779**********99888.....***************************** PP FAR1 86 nHela 90 nH ++ Pav_sc0001369.1_g440.1.mk 569 NHLIS 573 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 827 aa Download sequence
MEIASANIEQ VPDGECNEIV TDRDGVLTDL DVQNGALEGR KEFVAPAVGM EFESYDDAYN 60 YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAML 120 RMRLVDSKRW RVLEVTLEHN HLLGAKIYKS IKKVGSGMKR KSQSSSDAEK RTIKLYRALV 180 IDSGGDGTSN SNPTDIRNFP DHPNQLNLKK VYTREIFKKF QFEVEEMYSC FSTTQLHVDG 240 PIIIFLVKER VVVEGNRREI RDYEVLYNRT AGEVRCICSC FNFYGYLCRH ALCVLNFNGV 300 EEIPSKYILS RWKKDFKRIY IPDHGSSNAD DTDRMQWFNQ LYRSALQIVE EGVISLDHYK 360 VALQAFEESL NRFYIPFPPR ILSSDGGKDS FNLLSFSSIG LSHFVRHAPL SLLSECTCRF 420 SGNSPATLRS DMDEVSLNTE PGGDDDADEF EIEGDCAMTD FISQTGIIQG ENPLPPVVGM 480 EFDSYEDVYY FYNCYAKQQG FGVRVSNTWY RKSKERYRGK LSCSSAGFKK KSEANRPRPE 540 TRTGCPAMIK FRLMDSNRWR VIEVELEHNH LISPASGKFY KSHKSVGVGT KRALQLDTAE 600 EVQKIRLFRT VIIDSEDKYD QALQTHHRLE ALADLDSRNS SYMLKSRCYF ELQLAKVYTN 660 DILRKFESEV EGMYSCFSTS QLNPDGPVIT YIVKEQTEVD GNRKEVRDYE VLYNPSEMEV 720 LCICGMFNLR GYLCRHTLSV LNQNGVEEIP AQYVLSRWRK DIKRNYIFYH SCSGIDINNP 780 VHRYDHLYKC IVQVVEEGRK SQDRYKVAFG ALDEILNKLC LTEDPAL

Sequence ? help Back to Top

Protein Sequence Length: 827 aa Download sequence

MEIASANIEQ VPDGECNEIV TDRDGVLTDL DVQNGALEGR KEFVAPAVGM EFESYDDAYN  60
YYNCYAKEVG FRVRVKNSWF KRNSREKYGA VLCCSSQGFK RIKDVNRLRK ETRTGCPAML  120
RMRLVDSKRW RVLEVTLEHN HLLGAKIYKS IKKVGSGMKR KSQSSSDAEK RTIKLYRALV  180
IDSGGDGTSN SNPTDIRNFP DHPNQLNLKK VYTREIFKKF QFEVEEMYSC FSTTQLHVDG  240
PIIIFLVKER VVVEGNRREI RDYEVLYNRT AGEVRCICSC FNFYGYLCRH ALCVLNFNGV  300
EEIPSKYILS RWKKDFKRIY IPDHGSSNAD DTDRMQWFNQ LYRSALQIVE EGVISLDHYK  360
VALQAFEESL NRFYIPFPPR ILSSDGGKDS FNLLSFSSIG LSHFVRHAPL SLLSECTCRF  420
SGNSPATLRS DMDEVSLNTE PGGDDDADEF EIEGDCAMTD FISQTGIIQG ENPLPPVVGM  480
EFDSYEDVYY FYNCYAKQQG FGVRVSNTWY RKSKERYRGK LSCSSAGFKK KSEANRPRPE  540
TRTGCPAMIK FRLMDSNRWR VIEVELEHNH LISPASGKFY KSHKSVGVGT KRALQLDTAE  600
EVQKIRLFRT VIIDSEDKYD QALQTHHRLE ALADLDSRNS SYMLKSRCYF ELQLAKVYTN  660
DILRKFESEV EGMYSCFSTS QLNPDGPVIT YIVKEQTEVD GNRKEVRDYE VLYNPSEMEV  720
LCICGMFNLR GYLCRHTLSV LNQNGVEEIP AQYVLSRWRK DIKRNYIFYH SCSGIDINNP  780
VHRYDHLYKC IVQVVEEGRK SQDRYKVAFG ALDEILNKLC LTEDPAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	8e-81	FAR1 family protein