PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001369.1_g340.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 520aa MW: 61275.4 Da PI: 5.5889

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001369.1_g340.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	70.3	4.5e-22	134	217	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 ++Yn YAke+GF +r+++s ++++++e + ++C++eg+++ ++ + ++++etrtgC a++++++ ++++w+v++++le Pav_sc0001369.1_g340.1.mk 134 NYYNCYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTIKEAN-----SRKKETRTGCLAMIRLRLVESNRWRVDEVKLE 212 69**************************************99888.....88999*********************** PP FAR1 85 HnHel 89 HnH + Pav_sc0001369.1_g340.1.mk 213 HNHLF 217 *77 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MTGENTFSPS DQVFSANSNL HITIQEGSQS SEQLLENENN DLENDCEQLF EIEGNEPQSE 60 RDDTSDQLFD IQSNDHENDG GDINEHLFEI EGNDHESSRD DRTIIDYQNG GSQEKAYPPP 120 VVGLEFDSYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC EGFKTIKEAN 180 SRKKETRTGC LAMIRLRLVE SNRWRVDEVK LEHNHLFDPE RAQNSKSHKR MDSGAKRKME 240 PTVDVEVRTI KLYRTPVVDA VEKKRQEEAR NDFESRELTP MLRTRCYYEL QLSKFYTKDV 300 FIKFQDEVVL MSSCFSITQV HTNGPIVTYM IKEREGEEIM RDNNRNFEVM YDKAGAEVRC 360 MCSCFNLNGY LCRHALRILN YNGVEEIPFQ YILSRWRKDF KRLYVPDLGS NNVDITNPVQ 420 WFDHLYRRAM QVVQEGMISQ DHYMVSWQAF KESLNKVRLV ADKNEKQERK RPAIYCMNRW 480 VEPRKTTEYR EFREKDQQST HKAFPPLSHW EEEDKCRKPS

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MTGENTFSPS DQVFSANSNL HITIQEGSQS SEQLLENENN DLENDCEQLF EIEGNEPQSE  60
RDDTSDQLFD IQSNDHENDG GDINEHLFEI EGNDHESSRD DRTIIDYQNG GSQEKAYPPP  120
VVGLEFDSYD DAYNYYNCYA KELGFAIRVK SSWTKRNSKE KRGAVLCCNC EGFKTIKEAN  180
SRKKETRTGC LAMIRLRLVE SNRWRVDEVK LEHNHLFDPE RAQNSKSHKR MDSGAKRKME  240
PTVDVEVRTI KLYRTPVVDA VEKKRQEEAR NDFESRELTP MLRTRCYYEL QLSKFYTKDV  300
FIKFQDEVVL MSSCFSITQV HTNGPIVTYM IKEREGEEIM RDNNRNFEVM YDKAGAEVRC  360
MCSCFNLNGY LCRHALRILN YNGVEEIPFQ YILSRWRKDF KRLYVPDLGS NNVDITNPVQ  420
WFDHLYRRAM QVVQEGMISQ DHYMVSWQAF KESLNKVRLV ADKNEKQERK RPAIYCMNRW  480
VEPRKTTEYR EFREKDQQST HKAFPPLSHW EEEDKCRKPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-70	FAR1 family protein