PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001335.1_g540.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 106aa MW: 12852.5 Da PI: 8.4911 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27.1 | 9.6e-09 | 32 | 71 | 4 | 45 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +T++E++ll++ ++ G++ W++Ia +++ gR ++++ +w Pav_sc0001335.1_g540.1.mk 32 MTEQEEDLLYRMYRLVGPR-WDLIAGRIP-GRKPEELERFWI 71 7****************99.*********.********9995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MQTMDRCRRK RPKTATSESD EVISNEWEFI NMTEQEEDLL YRMYRLVGPR WDLIAGRIPG 60 RKPEELERFW IMRHCDTFAD KRNQQTKDNS KKCWSSNVNS ESKFFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53200.1 | 3e-39 | MYB_related family protein |