PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001305.1_g870.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 273aa MW: 29035.7 Da PI: 8.7674

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001305.1_g870.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	44.3	3.8e-14	29	65	22	61
zf-Dof 22 nnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 nys ++ + ++ rryWt+GG+lrnvPvGgg+rk k+ Pav_sc0001305.1_g870.1.mk 29 SNYSKTKNK---QESRRYWTQGGTLRNVPVGGGCRKGKRP 65 577777665...578*********************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MDWELPQIIK TSPIWVLCSS DTPFSVLCSN YSKTKNKQES RRYWTQGGTL RNVPVGGGCR 60 KGKRPKTNSS SSSSPSLQPQ AQAQAPQQDQ QTVKNLSTTS PSSNLGAIES TGNLASHHQY 120 YPGGTGYLSS YAAIQSLNQS QPFNVGGHDQ LGGGASSNMS LLQGFNVSAP FGQFYQAGNT 180 KSIMVDQTAL YPSNQEGLLI QPTRPSAASD HDWPHQSFNI NRSSANASSA ASESALWATT 240 TSGNMNTTTT TSAGPSLNPN QWPDLPGSYG PPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	2e-11	Dof family protein