PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001270.1_g310.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HB-other

Protein Properties

Length: 437aa MW: 49628.2 Da PI: 9.0364

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001270.1_g310.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.8e-19	21	76	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t+ ql +Le+++++++yp++e++ + A++lgL+e+q++ WF+ rR k+k+ Pav_sc0001270.1_g310.1.mk 21 KKRKLKTPAQLMALEKFYNEHKYPTEEMKSQVAEQLGLSEKQISGWFCHRRLKDKR 76 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 437 aa Download sequence
MEESNELHSE ENKTSQDNNN KKRKLKTPAQ LMALEKFYNE HKYPTEEMKS QVAEQLGLSE 60 KQISGWFCHR RLKDKRLSRD ETCANGRQDR SSGVIQDRAS GLGQDSCGST KHGDHRYVDP 120 REVESRRLSG HDFPAADITR EYRSHYTERV GGMDNTSSES SSSLQDRFFT QNEDPYDVET 180 SRYLAHNGVF SPINPRGTEN MAYKPSGYLK VKGEAENAAI TAVKRQLGRH YQEDGPPLGV 240 EFDLLPPGAF ESPIIDSVHE PSIVGNPVLH SPDISGVKGQ LSPRTRYEVY NSKFSSQDLY 300 IQQENPCIMH GFDLQEKKSS KKLRQKSTYL NHTNSSPGKN SSLDIYDKSV GGTSAYNTNR 360 KDKMRSKRGY SGRKVTSEQT EPCLREYDGV SSPKLIQRSD YMKPKPSSSI VKRSETLYLS 420 TYMLYYSKTP IWKVLVL

Sequence ? help Back to Top

Protein Sequence Length: 437 aa Download sequence

MEESNELHSE ENKTSQDNNN KKRKLKTPAQ LMALEKFYNE HKYPTEEMKS QVAEQLGLSE  60
KQISGWFCHR RLKDKRLSRD ETCANGRQDR SSGVIQDRAS GLGQDSCGST KHGDHRYVDP  120
REVESRRLSG HDFPAADITR EYRSHYTERV GGMDNTSSES SSSLQDRFFT QNEDPYDVET  180
SRYLAHNGVF SPINPRGTEN MAYKPSGYLK VKGEAENAAI TAVKRQLGRH YQEDGPPLGV  240
EFDLLPPGAF ESPIIDSVHE PSIVGNPVLH SPDISGVKGQ LSPRTRYEVY NSKFSSQDLY  300
IQQENPCIMH GFDLQEKKSS KKLRQKSTYL NHTNSSPGKN SSLDIYDKSV GGTSAYNTNR  360
KDKMRSKRGY SGRKVTSEQT EPCLREYDGV SSPKLIQRSD YMKPKPSSSI VKRSETLYLS  420
TYMLYYSKTP IWKVLVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	5e-89	HB-other family protein