PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001265.1_g070.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 329aa    MW: 36848.1 Da    PI: 4.8712
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001265.1_g070.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.93.7e-102253132
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkklelee 32
                               lppGfrFhPtdeel+++yL+ kv + ++   +
  Pav_sc0001265.1_g070.1.mk 22 LPPGFRFHPTDEELITFYLASKVYNGSFCGVD 53
                               79*********************999844433 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MLGMEDAVMS ELIGEDINEQ GLPPGFRFHP TDEELITFYL ASKVYNGSFC GVDIAEDEWV  60
ICRINHKTGD KKNPLQLDRV EVEAASSNCN CLPPLLESPT AVKPTFLQQG QCPHQSHNPM  120
QMQSPPPLPP FLFQHQENDL KSLINPVVSQ PHLFSSFPIN AFQTQPSFSP TNNNNSASLT  180
NEKNPSPLQS LLFKSLFSSH DQDCNNTIPK QCKTEPNYFS HFQTPAINNN YNNNCDLNLL  240
NLMEKNHHHQ PNTPCHQYNN HPNDPLLFDC LDYSVLGFSD AAGTATTVHE HDTCPSTAFN  300
RAGFQTVLDL PPIKVTGESW PLDYIMDAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76420.16e-20NAC family protein