PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001250.1_g010.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 360aa MW: 41094.1 Da PI: 9.5909

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001250.1_g010.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.8	4.4e-07	75	99	1	25
TSSS-HHHHHHHHHHHHHTTTT-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWk 25 r+rW +eEd ll +v+q+G++ W+ Pav_sc0001250.1_g010.1.mk 75 RQRWRAEEDALLRAYVQQYGPREWN 99 89********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MRFPILHSTF ATLPDAGGIK AKTKLYLSLF PHPNNSLIII IIISSLVGGD ASKTKLGSLV 60 QLSRHLYLVM EMKERQRWRA EEDALLRAYV QQYGPREWNL RLGKWWEVFK EKQQREQKNN 120 KTVDPVDEGK YDRILETFAE KLVQERAAPS YLMATSNGSY LHTETSSPAP TMLPPWLSNS 180 NVTSNVRPPS PSVTLSLSPT VAPSPPIPWL QPDRGSDNSL VLGNMPHHGS VPVCGENLVI 240 SELVECSREL EEVHRAWAAH KKEASWRLRR VELQLESEKA CRRREKMEEI EAKVKALREE 300 QKAALDRIEA EYREQLAGLR RDAEAKEQKL TEQWVAKHLR LSKFLDQMGG RPRLAEPNGR

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MRFPILHSTF ATLPDAGGIK AKTKLYLSLF PHPNNSLIII IIISSLVGGD ASKTKLGSLV  60
QLSRHLYLVM EMKERQRWRA EEDALLRAYV QQYGPREWNL RLGKWWEVFK EKQQREQKNN  120
KTVDPVDEGK YDRILETFAE KLVQERAAPS YLMATSNGSY LHTETSSPAP TMLPPWLSNS  180
NVTSNVRPPS PSVTLSLSPT VAPSPPIPWL QPDRGSDNSL VLGNMPHHGS VPVCGENLVI  240
SELVECSREL EEVHRAWAAH KKEASWRLRR VELQLESEKA CRRREKMEEI EAKVKALREE  300
QKAALDRIEA EYREQLAGLR RDAEAKEQKL TEQWVAKHLR LSKFLDQMGG RPRLAEPNGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37630.1	1e-80	MYB family protein