PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001215.1_g330.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 246aa    MW: 28176.7 Da    PI: 8.6423
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001215.1_g330.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM867.2e-27159253128
                        NAM  53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel..vglkktLvfykgrapkgektdWvmheyrl 128
                                 +eke+yfF++r +ky+++ r+nr+t sg+Wkatg dk+++s k+ l  +glkk+Lv+y+g+a kg+ktdW+m+e+rl
  Pav_sc0001215.1_g330.1.mk  15 VGEKECYFFCRRGRKYRNSIRPNRVTGSGFWKATGIDKPIYSVKEPLecIGLKKSLVYYRGSAGKGTKTDWMMNEFRL 92 
                                4789**************************************7443355***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MSCLFSGNNE EVSTVGEKEC YFFCRRGRKY RNSIRPNRVT GSGFWKATGI DKPIYSVKEP  60
LECIGLKKSL VYYRGSAGKG TKTDWMMNEF RLPPHGHGKT TNILNAKDIT QEAEVWTLCR  120
IFKRIPSYKK YTPDNWKEGN TKQNPTDSSS KTCSFESENY CGKPHLSPQD SVVMQRIERS  180
SSRPVRVDEQ VDETNQWFKF VGETPHATSY SSLRDIPSDN DFFINGNWDE LRPVVQLAVD  240
PSFPSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.15e-55NAC family protein