PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001196.1_g850.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | B3 | ||||||||
Protein Properties | Length: 116aa MW: 13339.2 Da PI: 5.1874 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 31 | 4.5e-10 | 6 | 92 | 2 | 87 |
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-.TTHHHHHHHHT--TT-EEEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvlt.kGWkeFvkangLkegDfvvFkl 84 +k lt sd+ ++ + +p + ++ ++++s ++ ++ ++g We+ +++r+ + vl+ +GW +Fv+ +gLk+gD +v+ Pav_sc0001196.1_g850.1.br 6 EKCLTESDTVSR--FAFPISWLKVLPPVEQGSHEVNFQVTDGigFFWEFCCSIRGANRNPVLQsEGWLKFVNYKGLKVGDKIVLDS 89 677877888776..688999996664445555555555544444*******99888888555549******************995 PP -SS CS B3 85 dgr 87 + + Pav_sc0001196.1_g850.1.br 90 EAN 92 533 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence |
MAARYEKCLT ESDTVSRFAF PISWLKVLPP VEQGSHEVNF QVTDGIGFFW EFCCSIRGAN 60 RNPVLQSEGW LKFVNYKGLK VGDKIVLDSE ANDFKGTQFR IRAQKLNEEC DQWLDV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77850.1 | 3e-08 | ARF family protein |