PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0001124.1_g320.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 496aa MW: 54045 Da PI: 6.4501

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0001124.1_g320.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.7e-17	66	110	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+ Pav_sc0001124.1_g320.1.mk 66 RERWTEEEHKKFLEALKLYGRA-WRKIEEHVG-TKTAVQIRSHAQKF 110 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
MVGGLMLSPD MAAAQDQYDG SRSESVLSAN NGVSFSASGL QLKDQFSNGN DSAPKARKPY 60 TITKQRERWT EEEHKKFLEA LKLYGRAWRK IEEHVGTKTA VQIRSHAQKF FSKVARDSNG 120 SNVISEEPID IPPPRPKRKP MRPYPRKLVH PVNKETFIVE RPTRSASPNL SVSEPENQSP 180 TSVLSVIGSD TLGSADSNTP SRSLSPVSSA ADVHGVDLNH SEPPNPSLEE SGSTSPSVAE 240 NGSLPNMQLS MKLELFPTDN VAASGVSAEE VSARSLKLFG RTVLVTDSYR PSSPTSGTSK 300 SLPSDVKEEK PVQTSTPCNF TATESASGSV EHVWDNFPYG VHPGMYFMQF QNQNSNLVES 360 GSAYSAPWWT LCPKLPFPFI PFHKPQAVKE HFDGNLGDPK EVEKEGSWTG SDAGSVNDEE 420 NGDKCLGIET EGKEQEPNSV LQFKASANSA FSELRASPSP GKCRKGFVPY KRCLAERDTS 480 TIASEDRDGK RVHLSL

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

MVGGLMLSPD MAAAQDQYDG SRSESVLSAN NGVSFSASGL QLKDQFSNGN DSAPKARKPY  60
TITKQRERWT EEEHKKFLEA LKLYGRAWRK IEEHVGTKTA VQIRSHAQKF FSKVARDSNG  120
SNVISEEPID IPPPRPKRKP MRPYPRKLVH PVNKETFIVE RPTRSASPNL SVSEPENQSP  180
TSVLSVIGSD TLGSADSNTP SRSLSPVSSA ADVHGVDLNH SEPPNPSLEE SGSTSPSVAE  240
NGSLPNMQLS MKLELFPTDN VAASGVSAEE VSARSLKLFG RTVLVTDSYR PSSPTSGTSK  300
SLPSDVKEEK PVQTSTPCNF TATESASGSV EHVWDNFPYG VHPGMYFMQF QNQNSNLVES  360
GSAYSAPWWT LCPKLPFPFI PFHKPQAVKE HFDGNLGDPK EVEKEGSWTG SDAGSVNDEE  420
NGDKCLGIET EGKEQEPNSV LQFKASANSA FSELRASPSP GKCRKGFVPY KRCLAERDTS  480
TIASEDRDGK RVHLSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	3e-67	MYB_related family protein