PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0001046.1_g690.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 313aa    MW: 36094 Da    PI: 5.5114
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0001046.1_g690.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.57.9e-17260306149
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49 
                                lp+GfrF+Ptdeelv++yLk+k+eg++ e   +i+e+di+k+ePwdLp 
  Pav_sc0001046.1_g690.1.br 260 LPVGFRFRPTDEELVNYYLKNKLEGSHAEN--IIDEIDILKFEPWDLPG 306
                                79***********************99555..8**************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MQEDTRPPEN GDYFERARDL LLANSLSNND HNAFPPEFSA NDQEFLRTLI VEPQFRVTSD  60
TDREPAHHRV QSLQMRCEPQ ILYKLQCGSS QSRRDTDVIL HNQLSRQASS SVNVASKPQT  120
EVQLQSGTYQ REHRPQQQSG PISVFRDTSA DEYYTREKTR RITYPAEKPK EPEKPKPPPE  180
KPKEPPYPRT AAYFPKKVPQ GSMKQTENRT TSGNWKGSFI TWQTSPLTSP PSVYIFNTEK  240
DREMARLSRA AEEEEGDLSL PVGFRFRPTD EELVNYYLKN KLEGSHAENI IDEIDILKFE  300
PWDLPGNYDI TSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.21e-15NAC family protein