PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0001046.1_g020.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | NAC | ||||||||
Protein Properties | Length: 99aa MW: 11053.6 Da PI: 4.408 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 49.8 | 1.2e-15 | 14 | 66 | 1 | 54 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkae 54 +ppGfrF+Pt+eel+ +yL+k+v+ +k++ ++i ++d++k+ePwd++ k++ Pav_sc0001046.1_g020.1.br 14 VPPGFRFQPTEEELLLYYLRKRVSCEKIDP-DIICDIDLNKFEPWDIQGPPKSQ 66 69***************************9.99**************7433333 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
MTSISVSVNG ECKVPPGFRF QPTEEELLLY YLRKRVSCEK IDPDIICDID LNKFEPWDIQ 60 GPPKSQDQAL LTSWAAFDRL IASQLDGHTS SPIATLGSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46770.1 | 6e-18 | NAC family protein |