PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000910.1_g810.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 76aa MW: 8620.23 Da PI: 4.0653 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 33.5 | 9.9e-11 | 28 | 69 | 2 | 45 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + ++++E+ l+++ ++ G + W++Ia +++ gRt++++ +w Pav_sc0000910.1_g810.1.mk 28 LQFSEDEEALIIRMYNLVGER-WALIAGRIP-GRTAEEIEKYWS 69 579******************.*********.***********5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 76 aa Download sequence |
MADSEHSSSD DSFSDSQATE KSRQESELQF SEDEEALIIR MYNLVGERWA LIAGRIPGRT 60 AEEIEKYWSS TNSTSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01380.1 | 1e-18 | MYB_related family protein |