PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000907.1_g180.1.br | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | FAR1 | ||||||||
Protein Properties | Length: 172aa MW: 19712.1 Da PI: 4.6961 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 27.1 | 1.4e-08 | 71 | 111 | 1 | 42 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkre 42 ++Y+++A++ GFs+rk++s++s++ g i++r+fvC+++ + + Pav_sc0000907.1_g180.1.br 71 EYYSNFARKNGFSIRKARSTESQNLG-IYRRDFVCYQSMELK 111 69********************8888.********9876555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MAMKQSNNIW IRRQQCPCGD WKCYIQYEGD DLGSVSSQHV KSETTPSSPS SEVVFTPYVG 60 QIFKTDDDAF EYYSNFARKN GFSIRKARST ESQNLGIYRR DFVCYQSMEL KECEMLCMKN 120 CPCTAFATLD TRDGGSGCLL WFSELIDVRN FTENGQDIYF RMAASELGIE SF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 2e-44 | FAR1 family protein |