PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000886.1_g620.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 198aa MW: 22228.8 Da PI: 6.4231 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 30 | 1.2e-09 | 14 | 43 | 1 | 30 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIart 30 +g W++eEde+l+++++ +G g+W+++++ Pav_sc0000886.1_g620.1.mk 14 KGLWSPEEDEKLIRYITTYGHGCWRKVPEQ 43 678************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MGHHYCCKQR KVKKGLWSPE EDEKLIRYIT TYGHGCWRKV PEQADFVNQN FMIKPRDQTL 60 YSSPFPLLMF DAASADDIQA NNISAQAAEH FPIGVSNSKN GTWILDQQQH HHQVQALPSS 120 ASPFTNNNMD AHSLPAPVGP AIGNNNMVPI EVESCSNMNK EGEISMECLQ SSTQELNALV 180 HCRQAQHCSS SSFHFWDT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63910.1 | 2e-21 | MYB family protein |