PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000886.1_g610.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 124aa    MW: 14096.6 Da    PI: 4.8984
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000886.1_g610.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.21.1e-091443130
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                               rg W++eEde+l+++++ +G g+W+ ++++
  Pav_sc0000886.1_g610.1.mk 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEK 43
                               789************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 124 aa     Download sequence    
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAVHHQSC NINLDEEGDH  60
QMALECLMQR QELNEWVVSQ QQCSNYLFWD TVLVGEEEHH NIAQPAASSN AGANTLLSSF  120
PSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63910.15e-28MYB family protein