PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000877.1_g730.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 94aa    MW: 10413.6 Da    PI: 8.3764
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000877.1_g730.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer107.86.1e-342682360
                ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
                               +vrY eC+kNhAa+lGg+avDGC+Efm+s geegt++al+CaACgCHRnFHRreve+e
  Pav_sc0000877.1_g730.1.mk 26 TVRYGECQKNHAANLGGYAVDGCREFMAS-GEEGTTEALTCAACGCHRNFHRREVETE 82
                               79**************************9.999*********************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 94 aa     Download sequence    
MKKRQVVVKR DSSGRSSSTS SSMVRTVRYG ECQKNHAANL GGYAVDGCRE FMASGEEGTT  60
EALTCAACGC HRNFHRREVE TEVVCEYSPP NTYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G74660.12e-38ZF-HD family protein