PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pav_sc0000877.1_g1840.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 152aa MW: 17546.5 Da PI: 7.2719 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 67 | 5.6e-21 | 3 | 117 | 22 | 128 |
NAM 22 kvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkya....tgkrknratk..sgyWkatgkdkevlsk 95 kv +++++++e+i+++d y+++P++L +++ +e+ew+fF+++d ++ +g+r+ r++ g+Wk g++++++++ Pav_sc0000877.1_g1840.1.mk 3 KVFHRPVPAAEAIQDIDatqFYSTHPKNLV-TFSCGEREWFFFIHEDDENCsasaQGRRNIRVVGngVGFWKPNGSENPIHNE 84 56666666656666654333999******6.777899******999987763333566666655534788************* PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 +g++ k L++++g+ +k++kt+W m ey+l Pav_sc0000877.1_g1840.1.mk 85 DGNVYASKIFLTYFSGSLRKAKKTHWKMVEYHL 117 ********************************8 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 152 aa Download sequence |
MNKVFHRPVP AAEAIQDIDA TQFYSTHPKN LVTFSCGERE WFFFIHEDDE NCSASAQGRR 60 NIRVVGNGVG FWKPNGSENP IHNEDGNVYA SKIFLTYFSG SLRKAKKTHW KMVEYHLHSD 120 SHTEEEYQVL DAVQRREWVL GQLKRGNAYN GL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22380.1 | 3e-13 | NAC family protein |