PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Pav_sc0000877.1_g1000.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 242aa MW: 26893.9 Da PI: 4.5408 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.7 | 9.2e-10 | 17 | 40 | 1 | 24 |
NAM 1 lppGfrFhPtdeelvveyLkkkve 24 lppGfrFhPtdeel+++yL+kk e Pav_sc0000877.1_g1000.1.mk 17 LPPGFRFHPTDEELISHYLHKKNE 40 79******************9975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 242 aa Download sequence |
MENVPAGMVE QDEKIDLPPG FRFHPTDEEL ISHYLHKKNE WVICRVFEKN SGGKKTHISG 60 FVRYGALGNE MGPSGLPLLM DSSPYSSKTK LASESSYVPC FSNPDPTDVQ RDQGIVDYMN 120 NPLFGVSSNT SNFFPRAPFS NSFYSDQSAP ISANFQFPSS VLMQDQSILR ALLENNGSNM 180 RQSFKTEREM VSVSQETGLT SEMNNEISSV MSNLEMGRRP FGDQEAPAAA AGAVDLDNFW 240 NY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G61430.1 | 3e-46 | NAC family protein |