PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000866.1_g420.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 577aa MW: 65393.8 Da PI: 4.7015

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000866.1_g420.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.9	3.5e-52	18	144	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyW 83 +pGfrFhPtdeelvv+yLk+k+ +k+l+l +vi+e+d+yk++P++Lp + +k+++++w+fFs+rd+ky++g r+nrat++gyW Pav_sc0000866.1_g420.1.mk 18 APGFRFHPTDEELVVYYLKRKICKKRLKL-NVIAETDVYKWDPEELPglSLLKTGDRQWFFFSPRDRKYPNGGRSNRATRHGYW 100 69*************************.99***********644788899************************ PP NAM 84 katgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 katgkd+++++ ++ vglkktLv+ykgrap+ge+tdWvmhey+l Pav_sc0000866.1_g420.1.mk 101 KATGKDRNITC-YSRSVGLKKTLVYYKGRAPSGERTDWVMHEYTL 144 *******.9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MGSEDDPEML FRNGRFCAPG FRFHPTDEEL VVYYLKRKIC KKRLKLNVIA ETDVYKWDPE 60 ELPGLSLLKT GDRQWFFFSP RDRKYPNGGR SNRATRHGYW KATGKDRNIT CYSRSVGLKK 120 TLVYYKGRAP SGERTDWVMH EYTLDEEELK RCRNVQEYYA LYKVYKKSGP GPKNGEQYGA 180 PFREEEWADD ELPVVNSSAD RQIPVKQSVD VISVDPVKVN GEVHSALSDI EEFMKQIADE 240 AVLELPQMNG YAYTIPQAVS EEETQSAVVD LYSREVVCPE PNTMFNPSDH QCNLQASFDF 300 TQSDTSQIQL YEASEVTTSA PEIHEQGPPI LREEDFLEMD DLLGPEPTIS NIENPVDNLQ 360 FEGIDGLSEF DLYHDAAMFF HDMGPFDQGT VSHQQYMNSL GNNIVGQFEY QVQPNPPAEN 420 QVNHQLNPES TQMNNQLWTH TERAEPNQGF LSYSTSGVVY EPSNFASQAN QNQSGNEAAG 480 GPSQFSSALW AFVESIPTTP ASASENALVN RAFERMSSFS RLRINSVRAN VTAGSSSEAK 540 RAGRKRGFFF LPVLVALCAI FWVFMGTLRP WWRCLSA

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MGSEDDPEML FRNGRFCAPG FRFHPTDEEL VVYYLKRKIC KKRLKLNVIA ETDVYKWDPE  60
ELPGLSLLKT GDRQWFFFSP RDRKYPNGGR SNRATRHGYW KATGKDRNIT CYSRSVGLKK  120
TLVYYKGRAP SGERTDWVMH EYTLDEEELK RCRNVQEYYA LYKVYKKSGP GPKNGEQYGA  180
PFREEEWADD ELPVVNSSAD RQIPVKQSVD VISVDPVKVN GEVHSALSDI EEFMKQIADE  240
AVLELPQMNG YAYTIPQAVS EEETQSAVVD LYSREVVCPE PNTMFNPSDH QCNLQASFDF  300
TQSDTSQIQL YEASEVTTSA PEIHEQGPPI LREEDFLEMD DLLGPEPTIS NIENPVDNLQ  360
FEGIDGLSEF DLYHDAAMFF HDMGPFDQGT VSHQQYMNSL GNNIVGQFEY QVQPNPPAEN  420
QVNHQLNPES TQMNNQLWTH TERAEPNQGF LSYSTSGVVY EPSNFASQAN QNQSGNEAAG  480
GPSQFSSALW AFVESIPTTP ASASENALVN RAFERMSSFS RLRINSVRAN VTAGSSSEAK  540
RAGRKRGFFF LPVLVALCAI FWVFMGTLRP WWRCLSA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	36	45	KRKICKKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-160	NAC family protein