PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pav_sc0000862.1_g130.1.mk | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Family | MYB_related | ||||||||
Protein Properties | Length: 193aa MW: 21682.1 Da PI: 5.1343 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 29.4 | 1.8e-09 | 18 | 41 | 24 | 48 |
HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48 W++Iar+++ gRt++++k++w++++ Pav_sc0000862.1_g130.1.mk 18 WSRIARKLP-GRTDNEIKNYWRTHM 41 *********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 193 aa Download sequence |
MSNVQYSDSL TCCVVRLWSR IARKLPGRTD NEIKNYWRTH MRKKAQEKKR AASPSSSSSH 60 CSSSSNITST EGGASFYDTG GLEIKASSGA KKTGGDHQEQ EDEKKRDQKE YSLDDIWKDI 120 NLPEVNSIEP VYNGYSEEAC NIISCPLMAS PAPWEYCPDS LWKMDEEESK MFLPTTSDQF 180 LSCFEYGKAS LTG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G46130.2 | 4e-37 | MYB_related family protein |