PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000800.1_g060.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 238aa    MW: 26213.1 Da    PI: 9.2808
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000800.1_g060.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding574.5e-183479147
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               +g+W++eEd  l ++v+++G+++W++I+r++  gR++k+c++rw + 
  Pav_sc0000800.1_g060.1.mk 34 KGPWSAEEDRVLTRLVERYGPRNWSLISRYIK-GRSGKSCRLRWCNQ 79
                               79*****************************9.***********985 PP
2Myb_DNA-binding53.45.9e-1788130347
                                SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ 
  Pav_sc0000800.1_g060.1.mk  88 PFSQAEDETILAAHARFGNR-WATIARLLP-GRTDNAVKNHWNST 130
                                79******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MEAMNRCSSS TSSSDTSSSE SSLPRNPNKP ERIKGPWSAE EDRVLTRLVE RYGPRNWSLI  60
SRYIKGRSGK SCRLRWCNQL SPNVEHRPFS QAEDETILAA HARFGNRWAT IARLLPGRTD  120
NAVKNHWNST LKRRVGGEHH HHHQMDGVHF VGGGGNVANN EGMSTSSVSG TLVNGSVEFD  180
PLTELTLAPP GIGGAAMVSA QQRSESLPSG FWDAMRDVIA KEVRDYVSTT FSEPSGLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.11e-59MYB family protein