PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000762.1_g090.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 551aa MW: 61416.9 Da PI: 4.1306

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000762.1_g090.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	95.8	6.7e-30	6	94	1	88
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 l+pGfrFhPtdeelv++yLk+kv+gk++++ + i+ +diyk+ePwdLp k k+k+++ ewyfFs dkky +++r+nrat++g+ + Pav_sc0000762.1_g090.1.mk 6 LAPGFRFHPTDEELVWYYLKRKVSGKNFRF-DPISVIDIYKTEPWDLPgKsKLKTGDLEWYFFSFLDKKYGNSSRTNRATEKGIFQ 90 579************************9.99***********6348888999*************************9 PP NAM 85 atgk 88 ++g+ Pav_sc0000762.1_g090.1.mk 91 KSGT 94 9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 551 aa Download sequence
MGRNSLAPGF RFHPTDEELV WYYLKRKVSG KNFRFDPISV IDIYKTEPWD LPGKSKLKTG 60 DLEWYFFSFL DKKYGNSSRT NRATEKGIFQ KSGTGPKNGE QYGAPIAEEE WDDDDVTCVP 120 GELAADNVVV VSGGPNVETN DVSNGAYVEA FDNDQNFDTG IPSECPPLNF YYGETSNYVE 180 HSVEFVDDVT TAVIGSGETS EYCEDQKFFD LPVDYEMGGK PVKDEYLTSE NCDDLKYFDV 240 PEHYETDAKL VKDECFIEPS NDTNPADVNY PLNEPYFNPT ENPPVGDGLF LETNDLSNPV 300 ESTAGFDMLD EYLTYFDADD DISQYIDFDS CGMMGVENSV PDQSPVDQKQ LVNGETEQLP 360 MGVEHLAQAE DTNDASSSKQ KPEFKLESDV NYPFIKKASH MMLGNIPAPP AFASEFPAKD 420 AIVRLNSGAA SSSSVHVTAG MIRIRDITSS DNRMDWSFGK DGVVNLVFSV QLSQNDGNSG 480 NLVPMDGSLS GKTGCVVMRG WFLFMFFWVL FLSMSFKIGS YVYTREGSKC ITRYRINGSL 540 HHRMIPYSAG A

Sequence ? help Back to Top

Protein Sequence Length: 551 aa Download sequence

MGRNSLAPGF RFHPTDEELV WYYLKRKVSG KNFRFDPISV IDIYKTEPWD LPGKSKLKTG  60
DLEWYFFSFL DKKYGNSSRT NRATEKGIFQ KSGTGPKNGE QYGAPIAEEE WDDDDVTCVP  120
GELAADNVVV VSGGPNVETN DVSNGAYVEA FDNDQNFDTG IPSECPPLNF YYGETSNYVE  180
HSVEFVDDVT TAVIGSGETS EYCEDQKFFD LPVDYEMGGK PVKDEYLTSE NCDDLKYFDV  240
PEHYETDAKL VKDECFIEPS NDTNPADVNY PLNEPYFNPT ENPPVGDGLF LETNDLSNPV  300
ESTAGFDMLD EYLTYFDADD DISQYIDFDS CGMMGVENSV PDQSPVDQKQ LVNGETEQLP  360
MGVEHLAQAE DTNDASSSKQ KPEFKLESDV NYPFIKKASH MMLGNIPAPP AFASEFPAKD  420
AIVRLNSGAA SSSSVHVTAG MIRIRDITSS DNRMDWSFGK DGVVNLVFSV QLSQNDGNSG  480
NLVPMDGSLS GKTGCVVMRG WFLFMFFWVL FLSMSFKIGS YVYTREGSKC ITRYRINGSL  540
HHRMIPYSAG A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04410.1	8e-46	NAC family protein