PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000713.1_g640.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

TALE

Protein Properties

Length: 655aa MW: 72010.2 Da PI: 8.5884

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000713.1_g640.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.6	2.4e-09	371	408	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + Pav_sc0000713.1_g640.1.mk 371 FEHflHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVR 408 554459******************************88 PP
2	BELL	119.1	2e-38	235	306	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kkakL+s+l+eV++rY+qy++q+q vi sFe++ag gsak+Yt+lAl++iS++FrcLkdai+ qi Pav_sc0000713.1_g640.1.mk 235 QRQELQMKKAKLVSMLDEVEQRYRQYHQQMQFVITSFEQAAGFGSAKSYTHLALQTISKQFRCLKDAISAQI 306 69********************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 655 aa Download sequence
MATFFHHGSS EIQAPTDHAL QTLYLMNPNY VPSFSDSGQQ NPTPPSMLLF NHTPPPTTHH 60 LVGIPLHSAA VGSNNSDDHS PPSLQHQTDP SRVHYNLWGP MGGQTPIGVS AVSPTSATTQ 120 QGLSLSLSTH QQPGYNSNYR PSSFPAERDV PAKGTSLSSV SAISHGFSGV LLGSKYLKAA 180 QELLDEVVHV GKGSNAAELD GGIKDKMKLS RETTAGIGAS SSGGAKQGAE LNTAQRQELQ 240 MKKAKLVSML DEVEQRYRQY HQQMQFVITS FEQAAGFGSA KSYTHLALQT ISKQFRCLKD 300 AISAQIKAGS KTLGEEECLG AKIEGSRLKY IDNHVRQQRA LQQLGMVQHN PWRPQRGLPE 360 RAVSVLRAWL FEHFLHPYPK DSDKVMLAKQ TGLTRSQVSN WFINARVRLW KPMVEEMYVE 420 ETKEQEKNGS RNNANYKESG STTPRESAST RIDDQIFRST HENFSNQHPS PNEKSNNSSL 480 SASPMAGSLQ SQSGFNLVGM SNMQGSTKKR KSSEIENSPS SILSMDADMK ANETNREITT 540 DHANGFGTYP IPEIGRFDMN PEHLAQRFHG NGVSLTLGLP HRENISLSGT QQSFLSNHGQ 600 INIHDQLGRR FNTGGEADFG AINHPQPSHS GIGYEDMDMR SRKRFAAQLL PDFVA

Sequence ? help Back to Top

Protein Sequence Length: 655 aa Download sequence

MATFFHHGSS EIQAPTDHAL QTLYLMNPNY VPSFSDSGQQ NPTPPSMLLF NHTPPPTTHH  60
LVGIPLHSAA VGSNNSDDHS PPSLQHQTDP SRVHYNLWGP MGGQTPIGVS AVSPTSATTQ  120
QGLSLSLSTH QQPGYNSNYR PSSFPAERDV PAKGTSLSSV SAISHGFSGV LLGSKYLKAA  180
QELLDEVVHV GKGSNAAELD GGIKDKMKLS RETTAGIGAS SSGGAKQGAE LNTAQRQELQ  240
MKKAKLVSML DEVEQRYRQY HQQMQFVITS FEQAAGFGSA KSYTHLALQT ISKQFRCLKD  300
AISAQIKAGS KTLGEEECLG AKIEGSRLKY IDNHVRQQRA LQQLGMVQHN PWRPQRGLPE  360
RAVSVLRAWL FEHFLHPYPK DSDKVMLAKQ TGLTRSQVSN WFINARVRLW KPMVEEMYVE  420
ETKEQEKNGS RNNANYKESG STTPRESAST RIDDQIFRST HENFSNQHPS PNEKSNNSSL  480
SASPMAGSLQ SQSGFNLVGM SNMQGSTKKR KSSEIENSPS SILSMDADMK ANETNREITT  540
DHANGFGTYP IPEIGRFDMN PEHLAQRFHG NGVSLTLGLP HRENISLSGT QQSFLSNHGQ  600
INIHDQLGRR FNTGGEADFG AINHPQPSHS GIGYEDMDMR SRKRFAAQLL PDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-141	TALE family protein