PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000691.1_g750.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 315aa    MW: 36178 Da    PI: 7.3979
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000691.1_g750.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00067121137117
                                EEETTTTEEESSHHHHH CS
                    zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                                ++C+ C k+F+r  nL+
  Pav_sc0000691.1_g750.1.mk 121 FSCHVCFKTFNRYNNLQ 137
                                89***********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEPSEFSSSS SPFFSANDHV ETLNLFPNYE TPNAHLEPLP LISCLLRSPE HQVPDSHDEN  60
PKTCNEDHKE DEVTVALHIG LPEYSDGSVN YLNEKEDENN VTAQKYWIPT PEQILIGFTH  120
FSCHVCFKTF NRYNNLQFPI MFLLIDFTIP VLSTVMSSFP WKMHMWGHGS QYRRGPESLK  180
GTQPRAMLSI PCYCCAEGCK NNIDHPRAKP LKDFRTLQTH YKRKHGMKPF MCRKCGKLLA  240
VKGDWRTHEK NCGKRWLCIC GSDFKHKRSL KDHIKAFGHG HRPFPPNSFD EVRDLDEDTS  300
TTPSLFKGLS SDTTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.11e-112C2H2 family protein