PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000679.1_g280.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 482aa MW: 53688.7 Da PI: 4.4554

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000679.1_g280.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	81	2.6e-25	59	177	13	128
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +l ++Lk+ ++gk + i+e+d+yk+ePwdL + + + w+ Fs+ d kya++ r nrat +g+Wk tgk ++v Pav_sc0000679.1_g280.1.br 59 QLFRCFLKRMMQGKASQS---IPEIDVYKYEPWDLAElmfpDSPYQPRAWFSFSRPDYKYANSPRCNRATGKGFWKITGKPRQV 139 678899*****99666...**********8444553333778******************************** PP NAM 93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++++ k+tL+f++gr +k+++t Wv +ey+l Pav_sc0000679.1_g280.1.br 140 KSRqlPKSVTCKKRTLTFHEGRVSKSRNTGWVRQEYNL 177 866566677889**********************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
MSTTTEESVH DLLPKFRFHP SEEEMVNLLM KKVEGQDSQA MPDEIVYKPS DLPDNESIQL 60 FRCFLKRMMQ GKASQSIPEI DVYKYEPWDL AELMFPDSPY QPRAWFSFSR PDYKYANSPR 120 CNRATGKGFW KITGKPRQVK SRQLPKSVTC KKRTLTFHEG RVSKSRNTGW VRQEYNLTPT 180 DPGSNPNQLS GFVLCRMKNK STDNESDNKK QQDVSICVES ADPGIAGCMA SNSELDQAAG 240 IHLIPEAEEH LTYEELEHVL LGSGNQNDGE PGGYVSSYFD DMIQELCAKG GEYLDLPSPP 300 PEPPRQQQLA QLGNVPVTGD YIGSNSNNQA AAINHMIPDP EELLAYKELE RVLLCSCNPD 360 DGEPGGCVSS NMLQKLCAQL GEELDSPFRP PGPPELGNAP IGDIDPSLPN KNNIPTNYDS 420 KPVGNTASNF ENQTRSSEVY SQAEENLESF FCQFELEGDY LHANNYIGCN ESQSAALFPQ 480 SS

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

MSTTTEESVH DLLPKFRFHP SEEEMVNLLM KKVEGQDSQA MPDEIVYKPS DLPDNESIQL  60
FRCFLKRMMQ GKASQSIPEI DVYKYEPWDL AELMFPDSPY QPRAWFSFSR PDYKYANSPR  120
CNRATGKGFW KITGKPRQVK SRQLPKSVTC KKRTLTFHEG RVSKSRNTGW VRQEYNLTPT  180
DPGSNPNQLS GFVLCRMKNK STDNESDNKK QQDVSICVES ADPGIAGCMA SNSELDQAAG  240
IHLIPEAEEH LTYEELEHVL LGSGNQNDGE PGGYVSSYFD DMIQELCAKG GEYLDLPSPP  300
PEPPRQQQLA QLGNVPVTGD YIGSNSNNQA AAINHMIPDP EELLAYKELE RVLLCSCNPD  360
DGEPGGCVSS NMLQKLCAQL GEELDSPFRP PGPPELGNAP IGDIDPSLPN KNNIPTNYDS  420
KPVGNTASNF ENQTRSSEVY SQAEENLESF FCQFELEGDY LHANNYIGCN ESQSAALFPQ  480
SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	2e-30	NAC family protein